BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029E11SP1|AL429078
(105 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig326 188 2e-48
>3x_Contig326
Length = 1427
Score = 188 bits (94), Expect = 2e-48
Identities = 104/106 (98%), Gaps = 1/106 (0%)
Strand = Plus / Minus
Query: 1 agaatgagagc-gcggggaatagtaatagtaatagtaatagtaatagtgatagtaatatt 59
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1303 agaatgagagccgcggggaatagtaatagtaatagtaatagtaatagtgatagtaatatt 1244
Query: 60 aataatactaataatattaataatactaataatatttatkatatta 105
||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1243 aataatactaataatattaataatactaataatatttataatatta 1198
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1373
Number of Sequences: 1807
Number of extensions: 1373
Number of successful extensions: 297
Number of sequences better than 1.0e-20: 1
length of query: 105
length of database: 10,358,551
effective HSP length: 15
effective length of query: 90
effective length of database: 10,331,446
effective search space: 929830140
effective search space used: 929830140
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 48 (96.2 bits)